Seven hundred and five core collections from Chinese Sesame Gene Bank were investigated in four environments of China, including Luohe in Henan province (114.02E, 33.56N), Wuhan in Hubei province (114.30E, 30.60N), Nanning in Guangxi province (108.33E, 22.84N) and Sanya in Hainan province (109.31E, 18.14N). Totally, fifty-six traits were investigated, including yield related traits, disease resistant traits, quality traits, growth cycle related traits, and morphological traits. The phenotype of each accessions and the variation of the core collections could be queried below. Description of the 56 traits is listed in the table below.
Search the phenotype variation with trait |
Trait | Min_Luohe | Min_Sanya | Min_Wuhan | Min_Nanning | Max_Wuhan | Max_Nanning | Max_Wuhan | Max_Nanning | Ave_Wuhan | Ave_Nanning | Ave_Wuhan | Ave_Nanning |
Search the gene loci significantly associated with the trait in the GWAS |
Loci_ID | Trait | Linkage group | Position | P_value_with_cul | P_value_without_cul | Major_allele | Minor_allele | MAF | Location |
Trait name | Associated loci number | Description of trait |
C18:2 | 1 | The C18:2 content |
C16:0 | 5 | The C16 content(palmitic acid) |
C16:0/C16:1 | 2 | The C16:0/C16:1 ratio |
C16:1 | 2 | The C16 content(palmitoleic acid) |
C18:0 | 3 | The C18:0 cotent(stearic acid) |
C18:0/C18:1 | 2 | The C18:0/C18:1 |
C18:1 | 3 | The C18:1 content(oleic acid) |
C18:1/C18:2 | 5 | The C18:1/C18:2 ratio |
C18:3 | 3 | The C18:3 cotent(inolenic acid) |
C20:0 | 2 | The C20:0 cotent(arachidic acid) |
C20:0/C20:1 | 4 | The C20:0 and C20:1 ratio |
C20:1 | 1 | The C20:1 content(eicosenoic acid) |
C22:0 | 2 | The C22:0 content |
Capsule Dehiscent | 4 | Capsule Dehiscent of seed |
Capsule Edge Number | 25 | Capsule Edge Number |
Capsule Length | 10 | Capsule Length |
Capsule Number per Axil | 8 | Capsule Number per Axil |
Corolla Color | 21 | Corolla Color |
Corolla Length | 7 | Corolla Length |
Diameter of Main Stem | 9 | Diameter of Main Stem |
Effective Capsule Number in Branch | 13 | Effective Capsule Number in Branch |
Effective Capsule Number in Main Stem | 11 | Effective Capsule Number in Main Stem |
Effective Capsule Number in Plant | 4 | Effective Capsule Number in Plant |
Effective Capsule Numberin Plant | 1 | Effective Capsule Numberin Plant |
Flower Lip Color | 24 | Flower Lip Color |
Flowering Period Duration | 4 | Flowering Period Duration |
Full Flowering Date | 37 | Full Flowering Date |
Initiate Flowering Date | 39 | Initiate Flowering Date |
Last Flowering Date | 16 | Last Flowering Date |
Leaf Length | 4 | Leaf Length |
Leaf Shape | 20 | Leaf Shape |
Leaf Width | 24 | Leaf Width |
Life Cycle Period | 7 | Life Cycle Period |
Lifecycle Period | 2 | Lifecycle Period |
Maturation Period | 7 | Maturation Period |
Oil Content | 16 | Oil Content |
Petiole Color | 8 | Petiole Color |
Petiole Length | 22 | Petiole Length |
Plant Height | 14 | Plant Height |
Primary Branch Angle | 4 | Primary Branch Angle |
Primary Branch Number | 23 | Primary Branch Number |
Protein Content | 6 | Protein Content |
Reproduction Period | 1 | Reproduction Period |
Resistance of Macrophomina Phaseoli | 2 | Resistance of Macrophomina Phaseoli |
Seed Color | 8 | Seed Color |
Seed Number per Capsule | 17 | Seed Number per Capsule |
Seed Shape | 6 | Seed Shape |
Sesamin Content | 14 | Sesamin Content |
Sesamolin Content | 15 | Sesamolin Content |
SFA | 4 | Saturated fatty acid |
SFA/USFA | 3 | The ratio of SFA and USFA |
Susceptibility of Phyllody Disease | 13 | Susceptibility of Phyllody Disease |
Thousand Seeds Weight | 1 | Thousand Seeds Weight |
USFA | 3 | Unsaturated fatty acid |
Yield of Branch per Plant | 17 | Yield of Branch per Plant |
Yield of Main Stem Per Plant | 1 | Yield of Main Stem Per Plant |
Yield of Main Stem per Plant | 8 | Yield of Main Stem per Plant |
Yield per Capsule | 24 | Yield per Capsule |
Yield per Plant | 5 | Yield per Plant |